CDS

Accession Number TCMCG073C40144
gbkey CDS
Protein Id XP_010526462.1
Location join(2686777..2686996,2688374..2688683,2688846..2689398)
Gene LOC104804022
GeneID 104804022
Organism Tarenaya hassleriana

Protein

Length 360aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010528160.1
Definition PREDICTED: serine/arginine repetitive matrix protein 1 isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category S
Description Zinc finger domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13209        [VIEW IN KEGG]
ko:K14651        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901796        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGCATCAGTTGGAGTGATCGGGCGGACAAAGAGATGGGGTCGGGAGAGAGGGATCAGCCCACTCAGCAGCCTCACATCAGTAGCCTCGTTGTGCGGCCTTCGGGCAGCGATGGAGGAGACGGCGGCCGCCTCTCCGACAGCGGCGACTACGAGTCCGGCAAGGTCCACCGCCACCCGCCTCCGTATTCTCGCTCGGATCGGCCCAAGGGTGATCTCGGACATAGAACTCGAGCAGCTTCTAGTTCTCCTGCCCGTCATGTAAATAGAGATCACCGACATGGCTCTGATCTTGATCATTCTGGAGGTGCACCTCGTGGTCGTGAGTTCAGCAGTAGAAGGGAAGCCTCTGGGAGATACAGAGATCATTCACCATCCTATGTCAGAGGTGGAGCTGGTGCCCGTCCTAATGGCAGAGGTTTGGATGGGCCTGAGCCTGGACTCAGACCTTTTAGAAGTGATGGAATGAACAGGAATAATAACCCTAATGTGCGACCAAGAGAAGGCGATTGGTTCTGTCCAGACCCACTATGCAGAAACTTGAACTTTGCGAGAAGGGAGTACTGCAACAACTGCAAGAGGCATCGCTATGCACCTCTAGTTAGCCCTCCACCTCCTCCACGTAGGGACTATCCCATCTCAACACCCCCTCCCCGTGGCCTCTCGGGTAATCCCTTGGATCTCTCCCCAGGCTACAGGTCTCCTCCTCGCCGCTGGCCCAGGGATCATCCACCGAGACACGATCATCATCCCGCATGGAGAGACAGAGAGCGAGAACAAGAGAGGGTGCGTTACCCAGATGATGATTACCTTAGCAGAAGGAGGCCACCATTGGATTGGAGCCAGGCTGATCGCGGAAGAGACCTGTTCCTGAAACCTCACCACGAGAGGCGGCCTATGCTCTCTCCTCCTCCACCGCTTCCCCCACCTCGTGGCAGTAGATGGGGTCGCGATGTTAGAGACAGGAGCAGGTCGCCGCCAATGAGAGGCGGTCCGCTACCGCTGCCGAGGGACTACCGCCGTGACAGAGGACGGGACGAGCGGCGTGGCCCTGCAAGAGCCCGGTTTGGAAATGCTTACTAA
Protein:  
MCISWSDRADKEMGSGERDQPTQQPHISSLVVRPSGSDGGDGGRLSDSGDYESGKVHRHPPPYSRSDRPKGDLGHRTRAASSSPARHVNRDHRHGSDLDHSGGAPRGREFSSRREASGRYRDHSPSYVRGGAGARPNGRGLDGPEPGLRPFRSDGMNRNNNPNVRPREGDWFCPDPLCRNLNFARREYCNNCKRHRYAPLVSPPPPPRRDYPISTPPPRGLSGNPLDLSPGYRSPPRRWPRDHPPRHDHHPAWRDREREQERVRYPDDDYLSRRRPPLDWSQADRGRDLFLKPHHERRPMLSPPPPLPPPRGSRWGRDVRDRSRSPPMRGGPLPLPRDYRRDRGRDERRGPARARFGNAY